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ERX13070563: qiita_ptid_17371:15666.WWspike.5.B10
2 ILLUMINA (Illumina NovaSeq X) runs: 11.4M spots, 3.3G bases, 947.3Mb downloads

Design: pure strain mixtures spiked in wastewater sequencing
Submitted by: University of California San Diego Microbiome Initiative (University of California San Diego Microbiome Init)
Study: CDC wastewater pathogen spike-in
PRJEB80377 • ERP164391 • All experiments • All runs
show Abstracthide Abstract
Spike-in pathogens in serial dilution to wastewater and fecal samples to determine limit of detection
Sample: CDC wastewater pathogen spike-in; 15666.WWspike.5.B10
SAMEA116084309 • ERS21082358 • All experiments • All runs
Organism: wastewater metagenome
Library:
Name: 15666.WWspike.5.B10
Instrument: Illumina NovaSeq X
Strategy: WGS
Source: METAGENOMIC
Selection: PCR
Layout: PAIRED
Construction protocol: Knight Lab Kapa HyperPlus
Experiment attributes: (show all 20 attributes...) (hide...)
center_name: UCSD
center_project_name: CDC
fraction_passing_quality_filter: 0.6247032492007798
i5_index_id: iTru5_02_G
i7_index_id: iTru7_304_11
index: GTGTCTGA
index2: TGGATGGT
lane: 8
quality_filtered_reads_r1r2: 11369358.0
raw_reads_r1r2: 18199614
run_center: IGM
run_date: 2024-09-13
run_prefix: WWspike_5_B10_S74_L008
runid: 240913_LH00444_0196_B22GTTYLT4
sample_plate: CDC_15666_Plate_5_diluted
sample_project: CDC
sequencing_meth: sequencing by synthesis
total_biological_reads_r1r2: 11705158.0
well_description: CDC_15666_Plate_5_diluted.WWspike.5.B10.C19
well_id_384: C19
Runs: 2 runs, 11.4M spots, 3.3G bases, 947.3Mb
Run# of Spots# of BasesSizePublished
ERR136999425,684,5561.6G473.6Mb2024-09-25
ERR137188465,684,6791.6G473.7Mb2024-09-26

ID:
35360943

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